A molecular single-cell lung atlas of lethal COVID-19

Benjamin Izar1, Jianwen Que1, Hanina Hibshoosh1, Anjali Saqi1, Olivier Elemento2, Robert E. Schwartz2, Patricia Ho1
1Columbia University Irving Medical Center, 2Weill Cornell Medicine, *Corresponding author
Description A molecular single-cell lung atlas of lethal COVID-19
Dataset ID LMEX0000004392
Assay Type Single-cell RNA-seq
Organism Human
Stages Adult | 65+ years
Cell Count 116314
Technology 10x Genomics Chromium Single Cell Gene Expression
External databases GEO: GSE171524
LungMAP IDAlt IDSpeciesSexRaceAgeAge Group
LMSP0000001130C51ctrHomo sapiensFemaleWhite70 years65+ years
LMSP0000001131C52ctrHomo sapiensFemaleWhite69 years65+ years
LMSP0000001132C53ctrHomo sapiensMaleUnknown or Not Reported79 years65+ years
LMSP0000001133C54ctrHomo sapiensFemaleAsian72 years65+ years
LMSP0000001134C55ctrHomo sapiensMaleUnknown or Not Reported69 years65+ years
LMSP0000001135C56ctrHomo sapiensMaleWhite75 years65+ years
LMSP0000001136C57ctrHomo sapiensMaleWhite68 years65+ years
LMSP0000001137L01covHomo sapiensMaleHispanic/Latino70 years65+ years
LMSP0000001138L03covHomo sapiensMaleWhite73 years65+ years
LMSP0000001139L04covHomo sapiensFemaleUnknown or Not ReportedAdult
LMSP0000001140L04covaddonHomo sapiensFemaleUnknown or Not ReportedAdult
LMSP0000001141L05covHomo sapiensFemaleHispanic/Latino78 years65+ years
LMSP0000001142L06covHomo sapiensFemaleHispanic/Latino80 years65+ years
LMSP0000001143L07covHomo sapiensMaleHispanic/Latino80 years65+ years
LMSP0000001144L08covHomo sapiensMaleHispanic/Latino83 years65+ years
LMSP0000001145L09covHomo sapiensMaleHispanic/Latino79 years65+ years
LMSP0000001156L10covHomo sapiensMaleUnknown or Not Reported84 years65+ years
LMSP0000001146L11covHomo sapiensMaleHispanic/Latino71 years65+ years
LMSP0000001147L12covHomo sapiensFemaleHispanic/Latino80 years65+ years
LMSP0000001148L13covHomo sapiensMaleHispanic/Latino63 yearsAdult
LMSP0000001149L15covHomo sapiensMaleHispanic/Latino68 years65+ years
LMSP0000001150L16covHomo sapiensFemaleHispanic/Latino70 years65+ years
LMSP0000001151L17covHomo sapiensMaleHispanic/Latino65 years65+ years
LMSP0000001152L18covHomo sapiensMaleHispanic/Latino72 years65+ years
LMSP0000001153L19covHomo sapiensFemaleUnknown or Not Reported69 years65+ years
LMSP0000001154L21covHomo sapiensFemaleUnknown or Not Reported68 years65+ years
LMSP0000001155L22covHomo sapiensMaleUnknown or Not Reported58 yearsAdult

7 of this study's 27 samples were also assayed by 1 other LungMAP studies, across 1 modality. Click any node to list those studies. The other 20 appear in no other study and are not drawn.