Post-viral flu lung regeneration
Terren K. Niethamer1, Joseph D. Planer1, Michael P. Morley1, Apoorva Babu2, Maria C. Basil1, Edward Cantu2, David B. Frank3, Joshua M. Diamond1, Ana N. Nottingham2, Shanru Li1, Lillian I. Levin1, Su Zhou1, Edward E. Morrisey1
1Perelman School of Medicine, University of Pennsylvania, 2Penn-Children’s Hospital of Philadelphia Lung Biology Institute, 3Children’s Hospital of Philadelphia, *Corresponding author
AF1 day 11 vs day 0 DEGsAF1 day 19 vs day 0 DEGsAF1 day 25 vs day 0 DEGsAF1 day 366 vs day 0 DEGsAF1 day 42 vs day 0 DEGsAF1 day 6 vs day 0 DEGsAF1 day 90 vs day 0 DEGsAF1 influenza infection vs control DEGsAF1 marker genesAF2 day 11 vs day 0 DEGsAF2 day 19 vs day 0 DEGsAF2 day 25 vs day 0 DEGsAF2 day 366 vs day 0 DEGsAF2 day 42 vs day 0 DEGsAF2 day 6 vs day 0 DEGsAF2 day 90 vs day 0 DEGsAF2 influenza infection vs control DEGsAF2 marker genesAT1 day 11 vs day 0 DEGsAT1 day 19 vs day 0 DEGsAT1 day 25 vs day 0 DEGsAT1 day 366 vs day 0 DEGsAT1 day 42 vs day 0 DEGsAT1 day 6 vs day 0 DEGsAT1 day 90 vs day 0 DEGsAT1 influenza infection vs control DEGsAT1 marker genesAT1_AT2 day 11 vs day 0 DEGsAT1_AT2 day 19 vs day 0 DEGsAT1_AT2 day 25 vs day 0 DEGsAT1_AT2 day 366 vs day 0 DEGsAT1_AT2 day 42 vs day 0 DEGsAT1_AT2 day 6 vs day 0 DEGsAT1_AT2 day 90 vs day 0 DEGsAT1_AT2 influenza infection vs control DEGsAT1_AT2 marker genesAT2 day 11 vs day 0 DEGsAT2 day 19 vs day 0 DEGsAT2 day 25 vs day 0 DEGsAT2 day 366 vs day 0 DEGsAT2 day 42 vs day 0 DEGsAT2 day 6 vs day 0 DEGsAT2 day 90 vs day 0 DEGsAT2 influenza infection vs control DEGsAT2 marker genesAdventitial_fibroblast day 11 vs day 0 DEGsAdventitial_fibroblast day 19 vs day 0 DEGsAdventitial_fibroblast day 25 vs day 0 DEGsAdventitial_fibroblast day 366 vs day 0 DEGsAdventitial_fibroblast day 42 vs day 0 DEGsAdventitial_fibroblast day 6 vs day 0 DEGsAdventitial_fibroblast day 90 vs day 0 DEGsAdventitial_fibroblast influenza infection vs control DEGsAdventitial_fibroblast marker genesAlveolar_transitional marker genesArterial_endothelium day 11 vs day 0 DEGsArterial_endothelium day 19 vs day 0 DEGsArterial_endothelium day 25 vs day 0 DEGsArterial_endothelium day 366 vs day 0 DEGsArterial_endothelium day 42 vs day 0 DEGsArterial_endothelium day 6 vs day 0 DEGsArterial_endothelium day 90 vs day 0 DEGsArterial_endothelium influenza infection vs control DEGsArterial_endothelium marker genesB_lymphocyte day 11 vs day 0 DEGsB_lymphocyte day 19 vs day 0 DEGsB_lymphocyte day 25 vs day 0 DEGsB_lymphocyte day 366 vs day 0 DEGsB_lymphocyte day 42 vs day 0 DEGsB_lymphocyte day 6 vs day 0 DEGsB_lymphocyte day 90 vs day 0 DEGsB_lymphocyte influenza infection vs control DEGsB_lymphocyte marker genesCAP1 day 11 vs day 0 DEGsCAP1 day 19 vs day 0 DEGsCAP1 day 25 vs day 0 DEGsCAP1 day 366 vs day 0 DEGsCAP1 day 42 vs day 0 DEGsCAP1 day 6 vs day 0 DEGsCAP1 day 90 vs day 0 DEGsCAP1 influenza infection vs control DEGsCAP1 marker genesCAP2 day 11 vs day 0 DEGsCAP2 day 19 vs day 0 DEGsCAP2 day 25 vs day 0 DEGsCAP2 day 366 vs day 0 DEGsCAP2 day 42 vs day 0 DEGsCAP2 day 6 vs day 0 DEGsCAP2 day 90 vs day 0 DEGsCAP2 influenza infection vs control DEGsCAP2 marker genesCiliated day 11 vs day 0 DEGsCiliated day 19 vs day 0 DEGsCiliated day 25 vs day 0 DEGsCiliated day 366 vs day 0 DEGsCiliated day 42 vs day 0 DEGsCiliated day 6 vs day 0 DEGsCiliated day 90 vs day 0 DEGsCiliated influenza infection vs control DEGsCiliated marker genesKrt5 marker genesLymphatic_endothelium day 11 vs day 0 DEGsLymphatic_endothelium day 19 vs day 0 DEGsLymphatic_endothelium day 25 vs day 0 DEGsLymphatic_endothelium day 366 vs day 0 DEGsLymphatic_endothelium day 42 vs day 0 DEGsLymphatic_endothelium day 6 vs day 0 DEGsLymphatic_endothelium day 90 vs day 0 DEGsLymphatic_endothelium influenza infection vs control DEGsLymphatic_endothelium marker genesMesothelium day 11 vs day 0 DEGsMesothelium day 19 vs day 0 DEGsMesothelium day 25 vs day 0 DEGsMesothelium day 366 vs day 0 DEGsMesothelium day 42 vs day 0 DEGsMesothelium day 6 vs day 0 DEGsMesothelium day 90 vs day 0 DEGsMesothelium influenza infection vs control DEGsMesothelium marker genesNK_cell day 11 vs day 0 DEGsNK_cell day 19 vs day 0 DEGsNK_cell day 25 vs day 0 DEGsNK_cell day 366 vs day 0 DEGsNK_cell day 42 vs day 0 DEGsNK_cell day 6 vs day 0 DEGsNK_cell day 90 vs day 0 DEGsNK_cell influenza infection vs control DEGsNK_cell marker genesNeutrophil day 11 vs day 0 DEGsNeutrophil day 19 vs day 0 DEGsNeutrophil day 25 vs day 0 DEGsNeutrophil day 366 vs day 0 DEGsNeutrophil day 42 vs day 0 DEGsNeutrophil day 6 vs day 0 DEGsNeutrophil day 90 vs day 0 DEGsNeutrophil influenza infection vs control DEGsNeutrophil marker genesPeribronchial_fibroblast day 11 vs day 0 DEGsPeribronchial_fibroblast day 19 vs day 0 DEGsPeribronchial_fibroblast day 25 vs day 0 DEGsPeribronchial_fibroblast day 366 vs day 0 DEGsPeribronchial_fibroblast day 42 vs day 0 DEGsPeribronchial_fibroblast day 6 vs day 0 DEGsPeribronchial_fibroblast day 90 vs day 0 DEGsPeribronchial_fibroblast influenza infection vs control DEGsPeribronchial_fibroblast marker genesPlasma_cell day 11 vs day 0 DEGsPlasma_cell day 19 vs day 0 DEGsPlasma_cell day 25 vs day 0 DEGsPlasma_cell day 366 vs day 0 DEGsPlasma_cell day 42 vs day 0 DEGsPlasma_cell day 6 vs day 0 DEGsPlasma_cell day 90 vs day 0 DEGsPlasma_cell influenza infection vs control DEGsPlasma_cell marker genesPost-viral flu marker genesSecretory day 11 vs day 0 DEGsSecretory day 19 vs day 0 DEGsSecretory day 25 vs day 0 DEGsSecretory day 366 vs day 0 DEGsSecretory day 42 vs day 0 DEGsSecretory day 6 vs day 0 DEGsSecretory day 90 vs day 0 DEGsSecretory influenza infection vs control DEGsSecretory marker genesT_lymphocyte day 11 vs day 0 DEGsT_lymphocyte day 19 vs day 0 DEGsT_lymphocyte day 25 vs day 0 DEGsT_lymphocyte day 366 vs day 0 DEGsT_lymphocyte day 42 vs day 0 DEGsT_lymphocyte day 6 vs day 0 DEGsT_lymphocyte day 90 vs day 0 DEGsT_lymphocyte influenza infection vs control DEGsT_lymphocyte marker genesVSMC day 11 vs day 0 DEGsVSMC day 19 vs day 0 DEGsVSMC day 25 vs day 0 DEGsVSMC day 366 vs day 0 DEGsVSMC day 42 vs day 0 DEGsVSMC day 6 vs day 0 DEGsVSMC day 90 vs day 0 DEGsVSMC influenza infection vs control DEGsVSMC marker genesVenous_endothelium day 11 vs day 0 DEGsVenous_endothelium day 19 vs day 0 DEGsVenous_endothelium day 25 vs day 0 DEGsVenous_endothelium day 366 vs day 0 DEGsVenous_endothelium day 42 vs day 0 DEGsVenous_endothelium day 6 vs day 0 DEGsVenous_endothelium day 90 vs day 0 DEGsVenous_endothelium influenza infection vs control DEGsVenous_endothelium marker genesaMAC day 11 vs day 0 DEGsaMAC day 19 vs day 0 DEGsaMAC day 25 vs day 0 DEGsaMAC day 366 vs day 0 DEGsaMAC day 42 vs day 0 DEGsaMAC day 6 vs day 0 DEGsaMAC day 90 vs day 0 DEGsaMAC influenza infection vs control DEGsaMAC marker genescDC1 day 11 vs day 0 DEGscDC1 day 19 vs day 0 DEGscDC1 day 25 vs day 0 DEGscDC1 day 366 vs day 0 DEGscDC1 day 42 vs day 0 DEGscDC1 day 6 vs day 0 DEGscDC1 day 90 vs day 0 DEGscDC1 influenza infection vs control DEGscDC1 marker genescDC2 day 11 vs day 0 DEGscDC2 day 19 vs day 0 DEGscDC2 day 25 vs day 0 DEGscDC2 day 366 vs day 0 DEGscDC2 day 42 vs day 0 DEGscDC2 day 6 vs day 0 DEGscDC2 day 90 vs day 0 DEGscDC2 influenza infection vs control DEGscDC2 marker genescMON day 11 vs day 0 DEGscMON day 19 vs day 0 DEGscMON day 25 vs day 0 DEGscMON day 366 vs day 0 DEGscMON day 42 vs day 0 DEGscMON day 6 vs day 0 DEGscMON day 90 vs day 0 DEGscMON influenza infection vs control DEGscMON marker genesiMAC day 11 vs day 0 DEGsiMAC day 19 vs day 0 DEGsiMAC day 25 vs day 0 DEGsiMAC day 366 vs day 0 DEGsiMAC day 42 vs day 0 DEGsiMAC day 6 vs day 0 DEGsiMAC day 90 vs day 0 DEGsiMAC influenza infection vs control DEGsiMAC marker genesiMON day 11 vs day 0 DEGsiMON day 19 vs day 0 DEGsiMON day 25 vs day 0 DEGsiMON day 42 vs day 0 DEGsiMON day 6 vs day 0 DEGsiMON day 90 vs day 0 DEGsiMON influenza infection vs control DEGsiMON marker genesmaDC marker genespMON day 11 vs day 0 DEGspMON day 19 vs day 0 DEGspMON day 25 vs day 0 DEGspMON day 366 vs day 0 DEGspMON day 42 vs day 0 DEGspMON day 6 vs day 0 DEGspMON day 90 vs day 0 DEGspMON influenza infection vs control DEGspMON marker genes
Gene symbols or identifiers, one per line.
Post-viral flu marker genes
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Derived locally from the configured pseudobulk table, scale recorded above. Not fetched from www.lungmap.net.