Human pulmonary alveolar microlithiasis (PAM) scRNA-Seq with SLC34A2 (Npt2b) mutations
Yasuaki Uehara1, Yusuke Tanaka1, Shuyang Zhao2, Nikolaos M. Nikolaidis1, Lori B. Pitstick1, Huixing Wu1, Jane J. Yu1, Erik Zhang1, Yoshihiro Hasegawa1, John G. Noel1, Jason C. Gardner1, Elizabeth J. Kopras1, Wendy D. Haffey1, Kenneth D. Greis1, Jinbang Guo2, Jason C. Woods2, Kathryn A. Wikenheiser-Brokamp2, Jennifer Kyle3, Charles Ansong3, Steven L. Teitelbaum4, Yoshikazu Inoue5, Göksel Altinişik6, Yan Xu2, Francis X. McCormack1
1University of Cincinnati College of Medicine, 2Cincinnati Children's Hospital Medical Center, 3Pacific Northwest National Laboratory, 4Washington University School of Medicine, 5National Hospital Organization Kinki-Chuo Chest Medical Center, 6Pamukkale University, *Corresponding author
Aberrant basaloid cell marker genesAirway basal marker genesAlveolar epithelial transitional (AT2-AT1) marker genesAlveolar fibroblast marker genesAlveolar macrophage (lipid homeostatic) marker genesAlveolar macrophage marker genesAlveolar type 1 marker genesAlveolar type 2 cell proliferating marker genesAlveolar type 2 marker genesB marker genesCD141+ conventional dendritic cell (cDC1) marker genesCD4+, alpha-beta T marker genesCD4+, regulatory T marker genesCD8+, alpha-beta T marker genesCapillary 1 marker genesCapillary 2 marker genesCapillary intermediate 1 marker genesCapillary intermediate 2 marker genesClassical monocyte marker genesClub (Bronchioles) marker genesClub (Trachea & Bronchus) marker genesCycling lymphatic endothelial cell of lung marker genesDeuterosomal cell marker genesGoblet marker genesGroup 1 ILC marker genesHillock basal marker genesInterstitial macrophage marker genesLangerhans cell marker genesLymphatic endothelial marker genesMast cell marker genesMegakaryocyte marker genesMetallothionein+ AM marker genesMigratory lung dendritic cell marker genesMulticiliated (Bronchioles) marker genesMulticiliated (Trachea & Bronchus) marker genesMulticiliated (axonemal) marker genesNK marker genesNasal serous cell marker genesNeutrophil marker genesNon-classical monocyte marker genesPAM CellRef2.0 marker genesPlasma marker genesPlasmacytoid dendritic cell marker genesProliferating AM marker genesPulmonary alveolar duct myofibroblast marker genesPulmonary arteriole endothelial marker genesPulmonary artery endothelial marker genesPulmonary capillary endothelial marker genesPulmonary ionocyte marker genesPulmonary neuroendocrine cell marker genesPulmonary vein endothelial marker genesRASC marker genesSystemic artery endothelial marker genesSystemic venous endothelial marker genesT cell proliferating marker genesTransitioning monocyte-derived macrophage marker genesiNKT marker genes
Gene symbols or identifiers, one per line.
PAM CellRef2.0 marker genes
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Derived locally from the configured pseudobulk table, scale recorded above. Not fetched from www.lungmap.net.