Lower airway mucosa of allergen-induced asthma exacerbation
Jehan Alladina1, Neal P. Smith1, Tristan Kooistra1, Kamil Slowikowski1, Isabela J. Kernin1, Jacques Deguine2, Henry L. Keen3, Kasidet Manakongtreecheep2, Jessica Tantivit2, Rod A. Rahimi1, Susan L. Sheng1, Nhan D. Nguyen1, Alexis M. Haring1, Francesca L. Giacona1, Lida P. Hariri1, Ramnik J. Xavier2, Andrew D. Luster1, Alexandra-Chloé Villani1, Josalyn L Cho3, Benjamin D. Medoff1
1Harvard Medical School, 2The Broad Institute, 3University of Iowa Carver College of Medicine, *Corresponding author
AS DC (AXL) Asthmatic vs Non-asthmatic DEGsAS DC (AXL) marker genesB cells Allergen vs Diluent DEGsB cells Asthmatic vs Non-asthmatic DEGsB cells marker genesBasal Allergen vs Diluent DEGsBasal Asthmatic vs Non-asthmatic DEGsBasal marker genesCD4 T (CD40LG) Allergen vs Diluent DEGsCD4 T (CD40LG) Asthmatic vs Non-asthmatic DEGsCD4 T (CD40LG) marker genesCD4 T cells, unassigned Asthmatic vs Non-asthmatic DEGsCD4 T cells, unassigned marker genesCD4 Th17 (RORA) Allergen vs Diluent DEGsCD4 Th17 (RORA) Asthmatic vs Non-asthmatic DEGsCD4 Th17 (RORA) marker genesCD4 Th2 (GATA3) Allergen vs Diluent DEGsCD4 Th2 (GATA3) Asthmatic vs Non-asthmatic DEGsCD4 Th2 (GATA3) marker genesCD4 ThIFNR (ISG15) Asthmatic vs Non-asthmatic DEGsCD4 ThIFNR (ISG15) marker genesCD4 Treg (FOXP3) Allergen vs Diluent DEGsCD4 Treg (FOXP3) Asthmatic vs Non-asthmatic DEGsCD4 Treg (FOXP3) marker genesCD8 T (CLIC3) Allergen vs Diluent DEGsCD8 T (CLIC3) Asthmatic vs Non-asthmatic DEGsCD8 T (CLIC3) marker genesCD8 T (EGR2) Asthmatic vs Non-asthmatic DEGsCD8 T (EGR2) marker genesCD8 T (GZMK) Allergen vs Diluent DEGsCD8 T (GZMK) Asthmatic vs Non-asthmatic DEGsCD8 T (GZMK) marker genesCD8 T cells, unassigned Asthmatic vs Non-asthmatic DEGsCD8 T cells, unassigned marker genesCiliated Allergen vs Diluent DEGsCiliated Asthmatic vs Non-asthmatic DEGsCiliated marker genesClub Allergen vs Diluent DEGsClub Asthmatic vs Non-asthmatic DEGsClub marker genesCycling (PCLAF) marker genesCycling basal Allergen vs Diluent DEGsCycling basal Asthmatic vs Non-asthmatic DEGsCycling basal marker genesDC1 (CLEC9A) marker genesDC2 (CD1C) Allergen vs Diluent DEGsDC2 (CD1C) Asthmatic vs Non-asthmatic DEGsDC2 (CD1C) marker genesDeuterosomal Asthmatic vs Non-asthmatic DEGsDeuterosomal marker genesEarly ciliated marker genesEpithelial cells, unassigned Allergen vs Diluent DEGsEpithelial cells, unassigned Asthmatic vs Non-asthmatic DEGsEpithelial cells, unassigned marker genesGoblet Allergen vs Diluent DEGsGoblet Asthmatic vs Non-asthmatic DEGsGoblet marker genesHillock Allergen vs Diluent DEGsHillock Asthmatic vs Non-asthmatic DEGsHillock marker genesIonocyte Asthmatic vs Non-asthmatic DEGsIonocyte marker genesLower airway mucosa marker genesMC1 (CXCL10) Asthmatic vs Non-asthmatic DEGsMC1 (CXCL10) marker genesMC2 (SPP1) Allergen vs Diluent DEGsMC2 (SPP1) Asthmatic vs Non-asthmatic DEGsMC2 (SPP1) marker genesMC3 (AREG) Allergen vs Diluent DEGsMC3 (AREG) Asthmatic vs Non-asthmatic DEGsMC3 (AREG) marker genesMC4 (CCR2) Allergen vs Diluent DEGsMC4 (CCR2) Asthmatic vs Non-asthmatic DEGsMC4 (CCR2) marker genesMNP, unassigned Allergen vs Diluent DEGsMNP, unassigned Asthmatic vs Non-asthmatic DEGsMNP, unassigned marker genesMac1 (FABP4) Allergen vs Diluent DEGsMac1 (FABP4) Asthmatic vs Non-asthmatic DEGsMac1 (FABP4) marker genesMac2 (A2M) Allergen vs Diluent DEGsMac2 (A2M) Asthmatic vs Non-asthmatic DEGsMac2 (A2M) marker genesMast cells Allergen vs Diluent DEGsMast cells Asthmatic vs Non-asthmatic DEGsMast cells marker genesMucous-ciliated Allergen vs Diluent DEGsMucous-ciliated Asthmatic vs Non-asthmatic DEGsMucous-ciliated marker genesNK cells Allergen vs Diluent DEGsNK cells Asthmatic vs Non-asthmatic DEGsNK cells marker genesSerous marker genesSuprabasal Allergen vs Diluent DEGsSuprabasal Asthmatic vs Non-asthmatic DEGsSuprabasal marker genesTgd (TRDC) Allergen vs Diluent DEGsTgd (TRDC) Asthmatic vs Non-asthmatic DEGsTgd (TRDC) marker genesmigDC (CCR7) Allergen vs Diluent DEGsmigDC (CCR7) Asthmatic vs Non-asthmatic DEGsmigDC (CCR7) marker genespDC (TCF4) Allergen vs Diluent DEGspDC (TCF4) Asthmatic vs Non-asthmatic DEGspDC (TCF4) marker genesquiesBasal Allergen vs Diluent DEGsquiesBasal Asthmatic vs Non-asthmatic DEGsquiesBasal marker genesquiesCD8 T Allergen vs Diluent DEGsquiesCD8 T Asthmatic vs Non-asthmatic DEGsquiesCD8 T marker genesquiesGoblet Allergen vs Diluent DEGsquiesGoblet Asthmatic vs Non-asthmatic DEGsquiesGoblet marker genesquiesMC Allergen vs Diluent DEGsquiesMC Asthmatic vs Non-asthmatic DEGsquiesMC marker genesquiesMac Asthmatic vs Non-asthmatic DEGsquiesMac marker genes
Gene symbols or identifiers, one per line.
Lower airway mucosa marker genes
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Derived locally from the configured pseudobulk table, scale recorded above. Not fetched from www.lungmap.net.