full_name short_name superclass cellcards_alias cell_ontology_id cell_ontology_name LungMAP_id C3LCN_alias C3LCN_MxIF_alias Airway basal Basal Epithelial Cell basal epithelial cell of tracheobronchial tree CL:0002329 basal epithelial cell of tracheobronchial tree LMCC0000000014 Basal cell Basal cell (Basal); Basal cell of epithelium of bronchus Hillock basal Hillock basal Epithelial Cell respiratory hillock basal cell CL:4030023 respiratory tract hillock cell LMCC0000000152 Hillock squamous Hillock squamous Epithelial Cell respiratory hillock squamous cell CL:4030023 respiratory tract hillock cell LMCC0000000151 Aberrant basaloid cell Aberrant basal Epithelial Cell basal cell CL:0002633 respiratory basal cell LMCC0000000014 Deuterosomal cell Deuterosomal Epithelial Cell deuterosomal CL:4033044 deuterosomal cell LMCC0000000082 Deuterosomal cell Deuterosomal cell (Deuterosomal) Multiciliated (Trachea & Bronchus) Ciliated-TB Epithelial Cell multiciliated columnar cell of tracheobronchial tree CL:0002145 multiciliated columnar cell of tracheobronchial tree LMCC0000000130 Multiciliated cell Multiciliated cell of lower conducting airway (Multiciliated) Multiciliated (Bronchioles) Ciliated-Bronch Epithelial Cell multiciliated columnar cell of lower conducting airway; PRMT8 positive CL:4030034 respiratory tract multiciliated cell Multiciliated cell subset 2 Multiciliated cell subset 2 (Multiciliated-2) Multiciliated (axonemal) Ciliated-axon Epithelial Cell multiciliated columnar cell of tracheobronchial tree CL:4030034 respiratory tract multiciliated cell LMCC0000000130 Multiciliated cell Multiciliated cell of lower conducting airway (Multiciliated) Club (Trachea & Bronchus) Club-TB Epithelial Cell club cell CL:0000158 club cell LMCC0000000141 Club cell Club cell (Club) Nasal club cell Club-nasal Epithelial Cell club cell CL:0000158 club cell LMCC0000000141 Club (Bronchioles) Club-Bronch Epithelial Cell club cell of bronchioles; SFTPB positive CL:0000158 club cell Bronchiolar club cell SFTPB+ Bronchiolar club cell SFTPB+ (Club.SFTPB) Goblet Goblet Epithelial Cell goblet cell of lung CL:1000143 lung goblet cell LMCC0000000013 Goblet celld Goblet cell.1d (Goblet-1); âGoblet cell.2 (Goblet-3); Goblet cell.3 (Goblet-2); Goblet cell.4 (Goblet-4); Goblet cell.5 (Goblet-5); Goblet cell.6 (Goblet-6) Nasal goblet cell Goblet-nasal Epithelial Cell goblet cell of lung CL:1000143 lung goblet cell LMCC0000000013 Tuft Tuft Epithelial Cell tuft cell CL:0002075 brush cell of tracheobronchial tree LMCC0000000016 Pulmonary ionocyte Ionocyte Epithelial Cell ionocyte of lung CL:0017000 pulmonary ionocyte LMCC0000000017 "Pulmonary ionocyte b,k" "Pulmonary ionocyte b,k (Ionocyte)" Pulmonary neuroendocrine cell PNEC Epithelial Cell neuroendocrine cell of the lung CL:1000223 pulmonary neuroendocrine cell LMCC0000000015 Pulmonary neuroendocrine cell Pulmonary neuroendocrine cell (PNEC); Neuroendocrine cell of epithelium of lobar bronchus; Neuroendocrine cell of epithelium of respiratory bronchiole; PNEC in neuroepithelial body (NEB) "Duct, basal" SMG Basal Epithelial Cell basal cell of airway submucosal gland CL:4033024 airway submucosal gland duct basal cell LMCC0000000006 Submucosal gland duct basal cell "Duct, secretory" SMG Duct Epithelial Cell collecting duct epithelial cell of airway submucosal gland CL:4033023 airway submucosal gland collecting duct epithelial cell Myoepithelial MEC Epithelial Cell myoepithelial cell of bronchus submucosal gland CL:4033003 myoepithelial cell of bronchus submucosal gland LMCC0000000007 Myoepithelial cell of submucosal gland Myoepithelial cell of submucosal gland (MEC) Mucous Mucous Epithelial Cell mucus secreting cell of bronchus submucosal gland CL:4033022 mucus secreting cell of bronchus submucosal gland LMCC0000000008 Mucous cell of submucosal gland (Mucous) Serous (bronchial) Serous Epithelial Cell serous secreting cell of bronchus submucosal gland CL:4033005 serous secreting cell of bronchus submucosal gland LMCC0000000009 Serous cell of submucosal gland Serous cell of submucosal gland (Serous) Nasal serous cell Serous-nasal Epithelial Cell serous secreting cell of bronchus submucosal gland CL:4033005 serous secreting cell of bronchus submucosal gland LMCC0000000009 RASC RASC Epithelial Cell respiratory airway secretory cell CL:4052031 respiratory airway secretory cell LMCC0000000083 Terminal and respiratory bronchiolar secretory cell Terminal and respiratory bronchiole secretory cell (TRB-SC) Alveolar type 1 AT1 Epithelial Cell alveolar type 1 epithelial cell CL:0002062 pulmonary alveolar type 1 cell LMCC0000000003 Alveolar epithelial type 1 cell Alveolar epithelial type 1 cell (AT1) Alveolar epithelial transitional (AT2-AT1) AT2-AT1 int. Epithelial Cell AT2/AT1 intermediate cell CL:0002063 pulmonary alveolar type 2 cell AT2/AT1 intermediate cell AT2/AT1 intermediate cell (AT2.AT1) Alveolar type 2 AT2 Epithelial Cell alveolar type 2 epithelial cell CL:0002063 pulmonary alveolar type 2 cell LMCC0000000004 Alveolar epithelial type 2 cell Alveolar epithelial type 2 cell (AT2) Alveolar type 2 cell proliferating AT2-prolif Epithelial Cell alveolar type 2 cell proliferating CL:4033080 cycling pulmonary alveolar type 2 cell Alveolar epithelial type 2 proliferating cell AT2 proliferating cell (AT2.p) Adventitial fibroblast AdvFB Mesenchymal cell adventitial fibroblast of lung CL:4028006 alveolar adventitial fibroblast LMCC0000000026 Adventitial fibroblast Adventitial fibroblast (AdvFB); Bronchovascular adventitial fibroblast; Alveolar adventitial fibroblast (AF2) Peribronchial fibroblast PBFB Mesenchymal cell peribronchial fibroblast CL:0002241 pulmonary interstitial fibroblast LMCC0000000122 Peribronchial fibroblast k Peribronchial fibroblast (PeribronchFB) Subpleural fibroblast SPFB Mesenchymal cell subpleural fibroblast CL:0002553 fibroblast of lung LMCC0000000097 Subpleural fibroblast f Subpleural fibroblast f (SubpleurFB) Interstitial fibroblast IntFB Mesenchymal cell pulmonary interstitial fibroblast CL:0002241 pulmonary interstitial fibroblast LMCC0000000103 Pulmonary interstitial fibroblast Pulmonary interstitial fibroblast (CT.Fibroblast) Alveolar fibroblast AF Mesenchymal cell fibroblast of lung CL:0002553 fibroblast of lung Alveolar fibroblast Alveolar fibroblast (AlvFB; AF1) Inflammatory alveolar fibroblast iALF Mesenchymal cell inflammatory fibroblast CL:0002553 fibroblast of lung LMCC0000000134 Alveolar fibroblast Alveolar fibroblast (AlvFB; AF1) Lipofibroblast 1 LipoFB1 Mesenchymal cell lipofibroblast CL:4028004 alveolar type 1 fibroblast cell LMCC0000000136 Alveolar fibroblast Alveolar fibroblast (AlvFB; AF1) Secondary crest myofibroblast SCMF Mesenchymal cell secondary crest myofibroblast CL:4033016 secondary crest myofibroblast LMCC0000000027 Secondary crest myofibroblasts Pulmonary alveolar duct myofibroblast ADM Mesenchymal cell alveolar duct myofibroblast of lung CL:0000186 myofibroblast cell LMCC0000000131 Alveolar duct myofibroblasts Alveolar duct myofibroblast (contractile) cADM Mesenchymal cell alveolar duct myofibroblast of lung CL:0000186 myofibroblast cell LMCC0000000131 Alveolar duct myofibroblasts Airway smooth muscle ASMC Mesenchymal cell tracheobronchial airway smooth muscle cell CL:0019019 tracheobronchial smooth muscle cell LMCC0000000023 Airway smooth muscle cell Airway smooth muscle cell (ASMC); Tracheobronchial smooth muscle cell; Bronchiolar smooth muscle cell Vascular smooth muscle VSMC Mesenchymal cell vascular associated smooth muscle cell CL:0000359 vascular associated smooth muscle cell LMCC0000000022 Vascular smooth muscle cell Vascular associated smooth muscle cell (VSMC); Blood vessel smooth muscle cell; Smooth muscle cell of pulmonary artery; Smooth muscle cell of bronchial artery Vascular smooth muscle (contractile) cVSMC Mesenchymal cell vascular associated smooth muscle cell CL:0000359 vascular associated smooth muscle cell LMCC0000000022 Vascular smooth muscle cell Vascular associated smooth muscle cell (VSMC); Blood vessel smooth muscle cell; Smooth muscle cell of pulmonary artery; Smooth muscle cell of bronchial artery Smooth muscle lymphatic LSMC Mesenchymal cell smooth muscle cell lymphatic CL:0019017 lymphatic vessel smooth muscle cell LMCC0000000105 Lymphatic vessel smooth muscle cell Pericytes Pericyte Mesenchymal cell lung pericyte CL:0009089 lung pericyte LMCC0000000028 Lung pericyte Lung pericyte (Pericyte) Chondrocytes Chondrocyte Mesenchymal cell tracheobronchial chondrocyte CL:0019002 tracheobronchial chondrocyte LMCC0000000021 "Chondrocyte g, k" Chondrocyte (Chondro) Perichondrial chondroprogenitor PC-prog Mesenchymal cell perichondrial fibroblast of lung CL:4033026 lung perichondrial fibroblast LMCC0000000102 Perichondrial fibroblast k Perichondrial fibroblast (PerichonFB) Mesothelial Mesothelial Mesenchymal cell mesothelial cell of lung visceral pleura CL:1000493 mesothelial cell of visceral pleura LMCC0000000029 Mesothelial cell Mesothelial cell of visceral pleura (Mesothelial) Pulmonary artery endothelial PAEC Endothelial Cell endothelial cell of pulmonary artery CL:1001568 pulmonary artery endothelial cell LMCC0000000031 Arterial endothelial cell Pulmonary artery endothelial cell (PAEC) Pulmonary arteriole endothelial PArEC Endothelial Cell pulmonary arteriole endothelial cell CL:1001567 lung endothelial cell LMCC0000000149 Arterial endothelial cell Arterial endothelial cell (AEC); Arterial endothelial cell subset 1 (AEC-1); Arterial endothelial cell subset 2 (AEC-2); Pulmonary artery endothelial cell (PAEC) Systemic artery endothelial SAEC Endothelial Cell endothelial cell of systemic arteries of lung CL:1000413 endothelial cell of artery LMCC0000000142 Arterial endothelial cell Bronchial artery endothelial cell (SAEC) Pulmonary capillary endothelial PCEC Endothelial Cell pulmonary capillary endothelial cell CL:4028001 pulmonary capillary endothelial cell LMCC0000000078 Microvascular endothelial cell; Capillary general endothelial cell; Capillary aerocyte endothelial cell Microvascular endothelial cell (Endo.Microvascular); Capillary general endothelial cell (CAP1 / gCAP); Capillary aerocyte endothelial cell (CAP2 / aCAP) Capillary 1 CAP1 Endothelial Cell alveolar capillary type 1 endothelial cell CL:4028002 alveolar capillary type 1 endothelial cell LMCC0000000034 Capillary general endothelial cell Capillary general endothelial cell (CAP1 / gCAP) Capillary intermediate 1 CAP1-int Endothelial Cell pulmonary capillary endothelial cell CL:4028001 pulmonary capillary endothelial cell LMCC0000000078 Capillary intermediate level 1 cell c Capillary intermediate level 1 cell c(CAP1.I1) Capillary 2 CAP2 Endothelial Cell alveolar capillary type 2 endothelial cell CL:4028003 alveolar capillary type 2 endothelial cell LMCC0000000035 Capillary aerocyte endothelial cell Capillary aerocyte endothelial cell (CAP2 / aCAP) Capillary intermediate 2 CAP2-int Endothelial Cell pulmonary capillary endothelial cell CL:4028001 pulmonary capillary endothelial cell LMCC0000000078 Capillary intermediate level 2 cell c Capillary intermediate level 2 cell c(CAP1.I2) Pulmonary vein endothelial PVEC Endothelial Cell endothelial cell of pulmonary vein CL:4033008 vein endothelial cell of respiratory system LMCC0000000032 Pulmonary venous endothelial cell h Pulmonary venous endothelial cell h (PVEC) Systemic venous endothelial SVEC Endothelial Cell endothelial cell of systemic veins of lung CL:4033008 vein endothelial cell of respiratory system LMCC0000000085 Systemic venous endothelial cell h Bronchial (systemic) venous endothelial cell h (BVEC / SVEC) Systemic venous endothelial (activated) SVEC-act Endothelial Cell endothelial cell of systemic veins of lung CL:4033008 vein endothelial cell of respiratory system LMCC0000000085 Systemic venous endothelial cell h Bronchial (systemic) venous endothelial cell h (BVEC / SVEC) Lymphatic endothelial LEC Endothelial Cell endothelial cell of respiratory system lymphatic vessel CL:0009086 endothelial cell of respiratory system lymphatic vessel LMCC0000000033 Lymphatic endothelial cell Lymphatic endothelial cell of respiratory system (LEC); Tracheobronchial lymphatic endothelial cell; Interlobular septa lymphatic endothelial cell Cycling lymphatic endothelial cell of lung LEC-cycling Endothelial Cell endothelial cell of respiratory system lymphatic proliferating CL:4033079 cycling endothelial cell of lymphatic vessel Lymphatic endothelial cell Lymphatic endothelial cell of respiratory system (LEC) "CD4+, alpha-beta T" CD4 T Immune cell "CD4-positive, alpha-beta T cell" CL:0000624 "CD4-positive, alpha-beta T cell" LMCC0000000086 CD4 T cell CD4 T cell (CD4T) "CD4+, regulatory T" Treg Immune cell regulatory T cell CL:0000815 regulatory T cell LMCC0000000088 CD4 T cell regulatory (TReg) "CD8+, alpha-beta T" CD8 T Immune cell "CD8-positive, alpha-beta T cell" CL:0000625 "CD8-positive, alpha-beta T cell" LMCC0000000087 CD8 T cell CD8 T cell (CD8T) T cell proliferating T-prolif Immune cell T cell proliferating CL:4033069 cycling T cell CD4 T cell proliferating (CD4T.p); NK T cell proliferating (NKT.p) iNKT iNKT Immune cell invariant NK T cell CL:0000921 type I NK T cell LMCC0000000155 NK T cell NK T cell (NKT) NK NK Immune cell natural killer cell CL:0000623 natural killer cell LMCC0000000045 Natural killer cell Natural killer cell (NK) Group 1 ILC ILC1 Immune cell group 1 innate lymphoid cell CL:0001067 group 1 innate lymphoid cell LMCC0000000132 Lymphocyte of B lineage B-lineage Immune cell lymphocyte of B lineage CL:0000945 lymphocyte of B lineage LMCC0000000114 B cell B cell (B) B B Immune cell B cell CL:0000236 B cell LMCC0000000046 B cell B cell (B) Plasma Plasma Immune cell plasma cell CL:0000786 plasma cell LMCC0000000111 Plasma cell Plasma cell (Plasma) Alveolar macrophage AM Immune cell alveolar macrophage CL:0000583 alveolar macrophage LMCC0000000038 Alveolar macrophage Alveolar macrophage (AM) Alveolar macrophage (lipid homeostatic) AM-lipid Immune cell alveolar macrophage CL:0000583 alveolar macrophage LMCC0000000038 Alveolar macrophage Alveolar macrophage (AM) Metallothionein+ AM MT+ AM Immune cell alveolar macrophage metallothionein-positive CL:4033042 metallothionein-positive alveolar macrophage LMCC0000000090 Alveolar macrophage Alveolar macrophage (AM) Proliferating AM AM-prolif Immune cell alveolar macrophage proliferating CL:4033077 cycling alveolar macrophage LMCC0000000091 Alveolar macrophage proliferating Alveolar macrophage proliferating cell (AM.p) Interstitial macrophage IM Immune cell interstitial lung macrophage CL:4033043 lung interstitial macrophage LMCC0000000039 Interstitial macrophage Interstitial macrophage cell (IM) Transitioning monocyte-derived macrophage tMDM Immune cell macrophage in lung CL:1001603 lung macrophage Macrophage; Interstitial macrophage; Monocyte; Patrolling (non-classical) monocyte; Inflammatory (classical) monocyte Macrophage (Macrophage); Interstitial macrophage cell (IM); Monocyte (Monocyte); Patrolling (non-classical) monocyte (pMON); Inflammatory (classical) monocyte (iMON) Classical monocyte iMON Immune cell classical monocytes CL:0000860 classical monocyte LMCC0000000040 Inflammatory (classical) monocyte Inflammatory (classical) monocyte (iMON) Non-classical monocyte pMON Immune cell non-classical monocyte CL:0000875 non-classical monocyte LMCC0000000041 Patrolling (non-classical) monocyte Patrolling (non-classical) monocyte (pMON) CD141+ conventional dendritic cell (cDC1) cDC1 Immune cell myeloid dendritic cell CD141-positive CL:0002394 CD141-positive myeloid dendritic cell LMCC0000000094 Classical (conventional) type 1 dendritic cell ** Classical (conventional) type 1 dendritic cell (cDC1) Migratory lung dendritic cell maDC Immune cell dendritic cell lung migratory CL:4033045 lung migratory dendritic cell LMCC0000000093 Dendritic cell; Classical (conventional) type 2 dendritic cell Dendritic cell (DC); Classical (conventional) type 2 dendritic cell (cDC2) Langerhans cell Langerhans Immune cell dendritic cell CL:0000453 Langerhans cell LMCC0000000065 Plasmacytoid dendritic cell pDC Immune cell plasmacytoid dendritic cell CL:0000784 plasmacytoid dendritic cell LMCC0000000092 Neutrophil Neutrophil Immune cell neutrophil CL:0000775 neutrophil LMCC0000000042 Neutrophil Neutrophil (Neutrophil) Mast cell Mast Immune cell mast cell CL:0000097 mast cell LMCC0000000044 Mast cell Mast cell (Mast) Hematopoietic stem cell HSC Hematopoietic cell CL:0000037 hematopoietic stem cell Megakaryocyte Megakaryocyte Immune cell megakaryocyte CL:4033018 lung megakaryocyte LMCC0000000104 Erythrocyte Erythrocyte Hematopoietic cell CL:0000232 erythrocyte Schwann cell Schwann Neural cell CL:0002573 Schwann cell Nonmyelinating Schwann cell **; Myelinating Schwann cell ** Nonmyelinating Schwann cell (nmSchwann); Myelinating Schwann cell (mSchwann)